Phylogenetic inference. Time-resolved trees, structured coalescent and birth–death models, ancestral state reconstruction, recombination-aware alignment, across clinical and environmental samples together.
Bioinformatics pipelines. Running and hardening our metagenomic and comparative genomics pipeli...
Sample processing. Accession incoming samples and take them through extraction across air, water, surface and swab matrices, under strict contamination control.
Molecular assays. Run qPCR/RT-qPCR panels for our priority pathogens and resistance targets, plus library prep for sequencing.
